Avsnitt Plasmid classification and binning with Sergio Arredondo-Alonso and Anita Schürch the bioinformatics chat Spela Dela Facebook Twitter Kopiera länk
Does a given bacterial gene live on a plasmid or the chromosome? What other genes live on the same plasmid? In this episode, we hear from Sergio Arredondo-Alonso and Anita Schürch, whose projects mlplasmids and gplas answer these types of questions. Links: mlplasmids: a user-friendly tool to predict plasmid- and chromosome-derived sequences for single species (Sergio Arredondo-Alonso, Malbert R. C. Rogers, Johanna C. Braat, Tess D. Verschuuren, Janetta Top, Jukka Corander, Rob J. L. Willems, Anita C. Schürch) gplas: a comprehensive tool for plasmid analysis using short-read graphs (Sergio Arredondo-Alonso, Martin Bootsma, Yaïr Hein, Malbert R.C. Rogers, Jukka Corander, Rob JL Willems, Anita C. Schürch) If you enjoyed this episode, please consider supporting the podcast on Patreon. Rss Apple Podcaster →